The NIH GDS Policy became effective for competing grant applications submitted for the January 25, 2015, receipt date; contract proposals submitted to NIH on or after January 25, 2015; and for intramural projects generating genomic data on or after August 31, 2015. The NIH GDS Policy applies to all NIH-funded research (e.g., grants, contracts, and intramural research) that generates large-scale human or non-human genomic data, regardless of the funding level, as well as the use of these data for subsequent research. Large-scale data include genome-wide association studies (GWAS), single nucleotide polymorphisms (SNP) arrays, and genome sequence, transcriptomic, epigenomic, and gene expression data.
Sequencing:
Database of Genomic Variants Archive (DGVa) http://www.ebi.ac.uk/dgva
dbSNP http://www.ncbi.nlm.nih.gov/snp
dbVar http://www.ncbi.nlm.nih.gov/dbvar
DNA DataBank of Japan (DDBJ) http://www.ddbj.nig.ac.jp
EBI Metagenomics http://www.ebi.ac.uk/metagenomics
EMBL Nucleotide Sequence Database http://www.ebi.ac.uk/ena
European Variation Archive (EVA) http://www.ebi.ac.uk/eva/?Home
GenBank http://www.ncbi.nlm.nih.gov/genbank
miRBase http://www.mirbase.org
NCBI Sequence Read Archive (SRA) http://www.ncbi.nlm.nih.gov/sra
NCBI Trace Archive http://www.ncbi.nlm.nih.gov/Traces/home
Uniprot http://www.ebi.ac.uk/uniprot
Omics:
ArrayExpress http://www.ebi.ac.uk/arrayexpress
Biological General Repository for Interaction Datasets (BioGRID) http://thebiogrid.org
Database of Interacting Proteins (DIP) http://dip.doe-mbi.ucla.edu/dip/Main.cgi
The European Genome-phenome Archive http://www.ebi.ac.uk/ega
Gene Expression Omnibus (GEO) http://www.ncbi.nlm.nih.gov/geo
Genome RNAi http://www.genomernai.org
GPM DB http://gpmdb.thegpm.org/index.html
IntAct Molecular Interaction Database http://www.ebi.ac.uk/intact
MetaboLights http://www.ebi.ac.uk/metabolights
PeptideAtlas http://www.peptideatlas.org
ProteomeXchange http://www.proteomexchange.org
Proteomics Identifications (PRIDE) http://www.ebi.ac.uk/pride/archive